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  1. Affek, H. P. (2012) Clumped isotope paleothermometry: Principles, applications, and challenges. in Linda C. Ivany and Brian Huber (eds.), Reconstructing Earth’s Deep-Time Climate – The State of the Art in 2012. Paleontological Society Papers, v. 18. 101-114.
  2. Eiler, J. M. (2011), Paleoclimate reconstruction using carbonate clumped isotope thermometry, Quaternary Sci. Rev., 30(25-26), 3575-3588. doi: 10.1016/j.quascirev.2011.09.001
  3. Eiler, J. M. (2007), “Clumped-isotope” geochemistry – The study of naturally-occurring, multiply-substituted isotopologues, Earth Planet. Sci. Lett., 262, 309-327. doi: 10.1016/j.epsl.2007.08.020
  4. Quade, J., C. Garzione, and J. Eiler (2007), Paleoelevation reconstruction using pedogenic carbonates, Rev. Mineral. Geochem., 66(53–87), doi: 10.2138/rmg.2007.66.3.

Theory, Methods, and Calibration

  1. Came R.E., Brand U., Affek H.P. (2014) Calibration of the carbonate clumped isotope paleothermometer using modern brachiopods. Chemical Geology. 377, 20-30. doi:
  2. Zaarur S., Affek H.P., Brandon M.T. (2013) A revised calibration of carbonate clumped isotopes thermometer. Earth and Planetary Research Letters. 382. 47-57. doi:
  3. Wacker, U., Fiebig, J., and Schöne, B.R. (2013), Clumped isotope analysis of carbonates: comparison of two different acid digestion techniques, Rapid Commun. Mass Spectrom., 27, 1631-1642. doi:10.1002/rcm.6609
  4. Bernasconi, S. M., B. Hu, U. Wacker, J. Fiebig, S. F. M. Breitenbach, and T. Rutz (2013), Background effects on Faraday collectors in gas-source mass spectrometry and implications for clumped isotope measurements, Rapid Commun. Mass Spectrom., 27(5), 603-612. doi:10.1002/rcm.6490
  5. Yoshida, N., M. Vasilev, P. Ghosh, O. Abe, K. Yamada, and M. Morimoto (2013), Precision and long-term stability of clumped-isotope analysis of CO2 using a small-sector isotope ratio mass spectrometer, Rapid Commun. Mass Spectrom., 27(1), 207-215. doi:10.1002/rcm.6431
  6. He, B., G. A. Olack, and A. S. Colman (2012), Pressure baseline correction and high-precision CO2 clumped-isotope (∆47) measurements in bellows and micro-volume modes, Rapid Commun. Mass Spectrom., 26(24), 2837-2853. doi:10.1002/rcm.6436
  7. Cao, X. and L. Yun (2012), Theoretical estimation of the equilibrium distribution of clumped isotopes in nature, Geochim. Cosmochim. Acta, 77, 292-303. doi: 10.1016/j.gca.2011.11.021
  8. Dennis, K. J., H. P. Affek, B. H. Passey, D. P. Schrag, and J. M. Eiler (2011), Defining an absolute reference frame for 'clumped' isotope studies of CO2, Geochim. Cosmochim. Acta, 75(22), 7117–7131. doi: 10.1016/j.gca.2011.09.025
  9. Schmid, T. W. and S. M. Bernasconi (2010), An automated method for “clumped-isotope” measurements on small carbonate samples, Rapid Commun. Mass Spectrom., 24(14), 1955-1963. doi: 10.1002/rcm.4598
  10. Guo, W., J. L. Mosenfelder, W. A. Goddard III, and J. M. Eiler (2009), Isotopic fractionations associated with phosphoric acid digestion of carbonate minerals: Insights from first-principles theoretical modeling and clumped isotope measurements, Geochim. Cosmochim. Acta, 73(24), 7203-7225. doi: 10.1016/j.gca.2009.05.071
  11. Huntington, K. W., J. M. Eiler, H. P. Affek, W. Guo, M. Bonifacie, L. Y. Yeung, N. Thiagarajan, B. Passey, A. Tripati, M. Daëron, and R. Came (2009), Methods and limitations of 'clumped' CO2 isotope (Δ47) analysis by gas-source isotope ratio mass spectrometry, J. Mass. Spectrom., 44(9), 1318-1329. doi: 10.1002/jms.1614
  12. Ghosh, P., J. M. Eiler, S. E. Campana, and R. F. Feeney (2007), Calibration of the carbonate ‘clumped isotope’ paleothermometer for otoliths Geochim. Cosmochim. Acta, 71(11), 2736-2744. doi: 10.1016/j.gca.2007.03.015
  13. Ghosh, P., J. Adkins, H. Affek, B. Balta, W. Guo, E. A. Schauble, D. Schrag, and J. M. Eiler (2006), 13C-18O bonds in carbonate materials: A new kind of paleothermometer, Geochim. Cosmochim. Acta, 70(6), 1439-1456. doi: 10.1016/j.gca.2005.11.014
  14. Schauble, E. A., P. Ghosh, and J. M. Eiler (2006), Preferential formation of 13C–18O bonds in carbonate minerals, estimated using first-principles lattice dynamics Geochim. Cosmochim. Acta, 70(10), 2510-2529. doi: 10.1016/j.gca.2006.02.011
  15. Wang, Z., E. A. Schauble, and J. M. Eiler (2004), Equilibrium thermodynamics of multiply substituted isotopologues of molecular gases, Geochim. Cosmochim. Acta, 68(23), 4779-4797. doi: 10.1016/j.gca.2004.05.039


  1. Douglas P., Affek H.P., Ivany L., Houben A.J.P., Sijp W., Sluijs A., Scouten S., Pagani M. (2014) Pronounced zonal heterogeneity in Eocene southern high latitude sea surface temperatures. PNAS. 111(18), 6582-6587. doi:
  2. Eagle, R., Risi, C., Mitchell, J., Neelin, D., Eiler, J., Seibt, U., Li., G., Tripati, A. (2013) High regional climate sensitivity over continental China inferred from glacial-recent changes in temperature and the hydrologic cycle, Proceedings of the National Academy of Sciences, 110, 8813–8818.
  3. Eagle, R., Eiler, J., Tripati, A., Ries, J., Freitas, P., Hiebenthal, C., Wanamaker Jr., A., Taviani, M., Elliot, M., Richardson, C., Marenssi, S., Nakamura, K., Ramirez, P., Roy, K. (2013), The influence of temperature and seawater carbonate saturation state on 13C-18O bond ordering in bivalve mollusks, Biogeosciences. doi:10.5194/bgd-10-157-2013.
  4. Kluge T., Affek H.P., Marx T., Aeschbach-Hertig W., Riechelmann D.F.C., Scholz D., Riechelmann S., Immenhauser A., Richter D.K., Fohlmeister J., Wackerbarth A., Mangini A., Spötl C. (2013), Reconstruction of drip-water δ¹⁸O based on calcite oxygen and clumped isotopes of kinetic speleothems from Bunker Cave (Germany). Climate of the Past, 9, 377-391. doi:
  5. Peters, N. A., K. W. Huntington, and G. D. Hoke (2013), Hot or not? Imact of seasonally variable soil carbonate formation on paleotemperature and O-isotope records from clumped isotope thermometry, Earth Planet. Sci. Lett., 361, 208-218. doi: 10.1016/j.epsl.2012.10.024.
  6. Brand, U., R. Posenato, R. Came , H. Affek, L. Angiolini , K. Azmy, and E. Farabegoli (2012) The end Permian mass extinction: a volcanic CO2 – climatic global catastrophe. Chem. Geol., 322-323, 121-144. doi: 10.1016/j.chemgeo.2012.06.015
  7. Suarez, M. B., B. H. Passey, and A. Kaakinen (2011), Paleosol carbonate multiple isotopologue signature of active East Asian summer monsoons during the late Miocene and Pliocene, Geology, 39(12), 1151-1154. doi: 10.1130/G32350.1
  8. Keating-Bitonti, C., L. C. Ivany, H. P. Affek, P. Douglas, and Samson S. D. (2011) Warm, not super-hot, temperatures in the early Eocene subtropics, Geology, 39(8), 771-774. doi: 10.1130/G32054.1
  9. Csank A. Z., A. K. Tripati, W. P. Patterson, R. A. Eagle, N. Rybczynski, A. P. Ballantyne, J. M. Eiler (2011), Estimates of Arctic land surface temperatures during the early Pliocene from two novel proxies, Earth Planet. Sci. Lett., 304(3-4), 291-299. doi: 10.1016/j.epsl.2011.02.030.
  10. Finnegan, S., K. Bergmann, J. M. Eiler, D. S. Jones, D. A. Fike, I. Eisenman, N. C. Hughes, A. K. Tripati, and W. W. Fischer (2011), The magnitude and duration of late Ordovician-early Silurian glaciation, Science, 331(6019), 903-906. doi: 10.1126/science.1200803.
  11. Tripati, A. K., R. A. Eagle, N. Thiagarajan, A. C. Gagnon, H. Bauch, P. R. Halloran, and J. M. Eiler (2010), Apparent equilibrium 13C-18O isotope signatures and 'clumped isotope' thermometry in foraminifera and coccoliths, Geochim. Cosmochim. Acta, 74(20), 5697-5717. doi: 10.1016/j.gca.2010.07.006.
  12. Passey, B. H., N. E. Levin, T. E. Cerling, F. H. Brown, and J. M. Eiler (2010), High-temperature environments of human evolution in East Africa based on bond ordering in paleosol carbonates, Proc. Natl. Acad. Sci. USA, 107(25), 11245-11249. doi: 10.1073/pnas.1001824107.
  13. Came, R. E., J. M. Eiler, J. Veizer, K. Azmy, U. Brand, and C. R. Weidman (2007), Coupling of surface temperatures and atmospheric CO2 concentrations during the Palaeozoic era, Nature, 449(7159), 198-201. doi: 10.1038/nature06085


  1. Quade, J., D. O. Breecker, M. Daëron, and J. Eiler (2011), The paleoaltimetry of Tibet: An isotopic perspective, Am. J. Sci., 311(2), 77-115. doi:10.2475/02.2011.01.
  2. Huntington, K. W., B. P. Wernicke, and J. M. Eiler (2010), Influence of climate change and uplift on Colorado Plateau paleotemperatures from carbonate clumped isotope thermometry, Tectonics, 29, TC3005. doi: 10.1029/2009TC002449.
  3. Garzione, C. N., G. D. Hoke, J. C. Libarkin, S. Withers, B. MacFadden, J. Eiler, P. Ghosh, and A. Mulch, Rise of the Andes, Science, 320(5881), 1304-1307. doi: 10.1126/science.1148615; Correction.
  4. Ghosh, P., C. N. Garzione, and J. M. Eiler (2006), Rapid uplift of the Altiplano revealed through 13C-18O bonds in paleosol carbonates, Science, 311(5760), 511-515. doi: 10.1126/science.1119365; Technical comment by Sempere et al.; Response from Ghosh et al.


  1. Zaarur, S., G. Olack, and H.P. Affek (2011), Paleo-environmental implications of clumped isotopes in land snail shells, Geochim. Cosmochim. Acta, 75(22), 6859-6869. doi: 10.1016/j.gca.2011.08.044.
  2. Eagle, R. A., T. Tütken, T. S. Martin, A. K. Tripati, H. C. Fricke, M. Connely, R. L. Cifelli, and J. M. Eiler (2011), Dinosaur body temperatures determined from isotopic (13C-18O) ordering in fossil biominerals, Science, 333(6041), 443-445. doi: 10.1126/science.1206196.
  3. Eagle, R. A., E. A. Schauble, A. K. Tripati, T. Tütken, R. C. Hulbert, and J. M. Eiler (2010), Body temperatures of modern and extinct vertebrates from 13C-18O bond abundances in bioapatite, Proc. Natl. Acad. Sci. USA, 107(23), 10377-10382. doi: 10.1073/pnas.0911115107.


  1. Halevy, I., W. W. Fischer, and J. M. Eiler (2011), Carbonates in the Martian meteorite Allan Hills 84001 formed at 18 ± 4 °C in a near-surface aqueous environment, Proc. Natl. Acad. Sci. USA, 108(41), 16895-16899. doi: 10.1073/pnas.1109444108
  2. Guo, W., and J. M. Eiler (2007), Temperatures of aqueous alteration and evidence for methane generation on the parent bodies of the CM chondrites, Geochim. Cosmochim. Acta, 71(22), 5565-5575. doi: 10.1016/j.gca.2007.07.029

Atmospheric Chemistry

  1. Affek, H. P.(2013), Clumped isotopic equilibrium and the rate of isotope exchange between CO2 and water, Am. J. Sci., 313, 309-315. doi:
  2. Yeung, L. Y., E. D. Young, and E. A. Schauble (2012), Measurements of 18O18O and 17O18O in the atmosphere and the role of isotope-exchange reactions, J. Geophys. Res, 117, D18306. doi: 10.1029/2012JD017992
  3. Yeung, L. Y., H. P. Affek, K. J. Hoag, W. Guo, A. A. Wiegel, E. L. Atlas, S. M. Schauffler, M. Okumura, K. A. Boering, and J. M. Eiler (2009), Large and unexpected enrichment in stratospheric 16O13C18O and its meridional variation, Proc. Natl. Acad. Sci. USA, 106(28), 11496-11501. doi: 10.1073/pnas.0902930106; Correction
  4. Affek, H. P., X. Xu, and J. M. Eiler (2007), Seasonal and diurnal variations of 13C18O16O in air: Initial observations from Pasadena, CA, Geochim. Cosmochim. Acta, 71, 5033-5043. doi: 10.1016/j.gca.2007.08.014
  5. Affek, H. P., and J. M. Eiler (2006), Abundance of mass-47 CO2 in urban air, car exhaust and human breath, Geochim. Cosmochim. Acta, 70(1), 1-12. doi: 10.1016/j.gca.2005.08.021
  6. Eiler, J. M., and E. Schauble (2004), 18O13C16O in the Earth's atmosphere, Geochim. Cosmochim. Acta, 68(23), 4767-4777. doi: 10.1016/j.gca.2004.05.035

Petrology, diagenesis and lithospheric applications

  1. Dale A., John C.M., Mozley P., Smalley P.C., Muggeridge A.H. (2014) Time-capsule concretions: unlocking burial diagenetic processes in the Mancos Shale using carbonate clumped isotopes. EARTH AND PLANETARY SCIENCE LETTERS, printed online 3 March 2014. doi:
  2. Loyd S., Corsetti F., Eiler J., and Tripati A. (2012), Determining the diagenetic conditions of concretion formation: Assessing temperatures and pore-waters using clumped isotopes, Journal of Sedimentary Research Current Ripples, 82, 1006-1016.
  3. Passey, B. H. and G. A. Henkes (2012), Carbonate clumped isotope bond reordering and geospeedometry, Earth Planet. Sci. Lett., 351-352, 223-236. doi:10.1016/j.epsl.2012.07.021.
  4. Swanson, E. M., B. P. Wernicke, J. M. Eiler, and S. Losh (2012), Temperatures and fluids on faults based on carbonate clumped-isotope thermometry, Am. J. Sci., 312(1), 1-21. doi:10.2475/01.2012.01.
  5. Huntington, K. W., D. A. Budd, B. P. Wernicke, and J. M. Eiler (2011), Use of clumped-isotope thermometry to constrain the crystallization temperature of diagenetic calcite, J. Sediment. Res., 81(9), 656-669. doi:10.2110/jsr.2011.51.
  6. Bristow, T. F., M. Bonafacie, A. Derkowski, J. M. Eiler, and J. P. Grotzinger (2011), A hydrothermal origin for isotopically anomalous cap dolostone cements from south China, Nature, 474(7349), 68-71. doi: 10.1038/nature10096.
  7. Ferry, J. M., B. H. Passey, C. Vasconcelos, and J. M. Eiler (2011), Formation of dolomite at 40-80°C in the Latemar carbonate buildup, Dolomites, Italy, from clumped isotope thermometry, Geology, 39(6), 571-574. doi: 10.1130/G31845.1.
  8. Dennis, K. J., and D. P. Schrag (2010), Clumped isotope thermometry of carbonatites as an indicator of diagenetic alteration, Geochim. Cosmochim. Acta., 74(14), 4110-4122. doi: 10.1016/j.gca.2010.04.005

Non equilibrium

  1. Kluge T. Affek H.P., Spötl C. Dubliansky Y. Devils Hole paleotemperatures and implications for oxygen isotope equilibrium fractionation. Earth and Planetary Research Letters. In press.
  2. Kluge, T., Affek, H.P., Zhang, Y.G., Dublyanski, Y., Spötl, C., Immenhauser, A., Richter, D.A.,. (2014) Clumped isotope thermometry of cryogenic cave carbonates. Geochimica et Cosmochimica Acta. 126, 541-554. doi:
  3. Saenger, C., H.P. Affek, T. Felis, N. Thiagarajan, J.M. Lough, and M. Holcomb (2012), Carbonate clumped isotope variability in shallow water corals: Temperature dependence and growth-related vital effects. Geochim. Cosmochim. Acta, 99, 224-242. doi: 10.1016/j.gca.2012.09.035.
  4. Kluge, T., and H. P. Affek (2012) Quantifying kinetic fractionation in Bunker cave speleothems using Δ47. Quat. Sci. Rev., 49, 82-94. doi: 10.1016/j.quascirev.2012.06.013.
  5. Daëron, M., W. Guo, J. Eiler, D. Genty, D. Blamart, R. Boch, R. Drysdale, R. Maire, K. Wainer, and G. Zanchetta (2011), 13C18O clumping in speleothems: Observations from natural caves and precipitation experiments, Geochim. Cosmochim. Acta, 75(12), 3303-3317. doi: 10.1016/j.gca.2010.10.032.
  6. Affek, H. P., M. Bar-Matthews, A. Ayalon, A. Matthews, and J. M. Eiler (2008), Glacial/interglacial temperature variations in Soreq cave speleothems as recorded by ‘clumped isotope’ thermometry Geochim. Cosmochim. Acta, 72(22), 5351-5360. doi: 10.1016/j.gca.2008.06.031
papers.1401209361.txt.gz · Last modified: 2014/05/27 12:49 by hagit